![]() ![]() It is possible to amend these scripts to have the Local-Url field contain all the linked files in a format similar to Mendeley. From the Bibdesk website,, Christiaan Hofman kindly provides Applescripts to automatically update the Local-Url field with the first linked file. I would prefer to use the pdf field in the bibtex file, but my Lisp knowledge is limited, so any help or a point in the right direction would be appreciated to get either solution working.Īlthough I have not figured out an answer to the above question, there does seem to be a work around using BibDesk Applescripts. I could use the "helm-bibtex-library-path" setting instead, but I would have to override the "helm-bibtex-find-pdf-in-library" function, to accommodate my custom sub-directory structure (based on author name and year) and Bibdesk's requirement that the filename be unique. Would it be possible to use this as basis to extract the information required? My question is, has anybody got the intergration between Bibdesk bibtex files and Helm-bibtex working using the Base64-encoded pathnames? There is a perl script on github for decoding the pathname from the Bibdesk fields that is used by Zotero for conversion of a Bibdesk bibtex file. Currently Bibdesk stores information about attached files in fields called "Bdsk-File-#" where the hash is a numeric, using Base64-encoded pathnames. To specify the location of the PDF associated with a reference it is possible to us two settings in Helm-bibtex "helm-bibtex-library-path" which will look in the specified directory for a file based on the citation key and the "helm-bibtex-pdf-field" which will get the path to the pdf from the specified field in the bibtex entry. I would like if possible to use the great addons Helm-bibtex and org-ref. Question is probably how you can integrate the two.Currently using Bibdesk to organise my references and various associated documents. htmlĭocuments, maybe text excerpts would be just as helpful?).īut if you like both Bibdesk and Org-mode, the more interesting Them with, say, ImageMagick (for PDFs at least and for. If you need thumbnails, someone could probably cobble up a way to add Org-bibtex.el in the development version or User-friendly way to convert between BibTeX and Org records. > create the record from the bibtex and embed the picture inside theĪs Matt Lundin already mentioned, Eric Schulte has recently provided a > I do think that BibDesk has great features to investigate, such as This seems to do everything the autofileįeature you describe can do, perhaps at the expense of a couple of If the path does not exist, it willīe created when an attachment is made. I even use this BibDesk file to cite things here on my blog. In Org, you can specify the attachment directory of your choice in theĪTTACH_DIR property of the entry. BibDesk saves citations in a BibTeX file which I could easily integrate with other tools like Pandoc to generate nicely styled papers with references. > structures you want as well!) Here is the example: > attach the file to certain directories (and build the directories > Moreover, Bibdesk has a great feature called autofile, which could > Second, Bibdesk has a much more intuitive UI, and thumbnails are Its database file is just an bibtexįile, so all the records is in plain text, even the thumbnails are storedīdsk-File-1 = The features provided in iTune, Papers2, Bibtex, which could provideįirst of all it's free, open resource. However this process is quite time consuming, and non-intuitive. To search all the Emacs entries, one could add to org-agendaįiles, then define a related org-agenda command. Then use org-attach to get the file settle down in the right place. To check in an entry such as "org-manual-7.5.pdf" to the library, one could Learned from this mailing list, I think one of the ways to organize academic My feeling is that, Org could get this done, but BibDesk does a better job. Mendeley, Zotero, Papers, Endnote, Org-mode, Yep, BibDesk. Was looking for similar way to organize all the academic references and even Mp3 format has the ability to storeĪll the metadata into the file itself, and iTune offers a way to modify andĭisplay certain kind of music according to the metadata. Here I'd like to discuss my workflow for Academic reference and recommend 15:47 ` Christian Moe 0 siblings, 2 replies 4+ messages in thread Academic Reference Workflows and recommendation of Bibdesk archives help / color / mirror / code / Atom feed * Academic Reference Workflows and recommendation of Bibdesk 22:54 Chao LU
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